BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027D05LP1|AL428713
(915 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1403 1699 0.0
>3x_Contig1403
Length = 7711
Score = 1699 bits (857), Expect = 0.0
Identities = 902/916 (98%), Gaps = 1/916 (0%)
Strand = Plus / Minus
Query: 1 gatccagaaacacttacccggacacaagccgattaacagttttatcatacatccgggtaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3245 gatccagaaacacttacccggacacaagccgattaacagttttatcatacatccgggtaa 3186
Query: 61 caaaacctcccaacgaaattcaaactacaatccgttgtgaaa-gagaaacaatagataac 119
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 3185 caaaacctcccaacgaaattcaaactacaatccgttgtgaaacgagaaacaatagataac 3126
Query: 120 ctgattaccctgcacacaattctacacatcttcatgaaaccttcgaattcagcaaaaaga 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3125 ctgattaccctgcacacaattctacacatcttcatgaaaccttcgaattcagcaaaaaga 3066
Query: 180 aacatcgcctgtgttcatctctaccaaccactctttgagagcatcaaatcacatctcaca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3065 aacatcgcctgtgttcatctctaccaaccactctttgagagcatcaaatcacatctcaca 3006
Query: 240 tcacctggcacgaaccaccgttgcatttctcttttcttttgactcttttttccctcgttt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3005 tcacctggcacgaaccaccgttgcatttctcttttcttttgactcttttttccctcgttt 2946
Query: 300 cagacagcacaaaagagctcatcgcatggtccgctgtgatgcagcatggactggttcctt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2945 cagacagcacaaaagagctcatcgcatggtccgctgtgatgcagcatggactggttcctt 2886
Query: 360 tttgttccttctgcgtgctaaattactactaagagaacatttttcttgccagcctggcga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2885 tttgttccttctgcgtgctaaattactactaagagaacatttttcttgccagcctggcga 2826
Query: 420 tgaaaggaaaccagcctagtatctctgcctagataaaaacttgttaaatccggtaaagga 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2825 tgaaaggaaaccagcctagtatctctgcctagataaaaacttgttaaatccggtaaagga 2766
Query: 480 ttattatatctgatatgccatgatgatctgtagtgtaaatatgtcactctacctcttggg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2765 ttattatatctgatatgccatgatgatctgtagtgtaaatatgtcactctacctcttggg 2706
Query: 540 ctaattaaatataaacctttaattctatcatacacgataccaatagcagcactgacgtgc 599
||||||||||||||||||||||||||||||||||||||||||| | | |||||||||
Sbjct: 2705 ctaattaaatataaacctttaattctatcatacacgataccaagattcccgctgacgtgc 2646
Query: 600 tgctagtactgctggcgtcgccaggnccatgtcgtttcttgttttctctttcactacttt 659
|||||||| | |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 2645 tgctagtagcgtgtgcgtcgccagcaccatgtcgtttcttgttttctctttcactacttt 2586
Query: 660 aatcactgcaggtgtctaatccatccatctcatccaattaagctcgaaaaagaaaaaatg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2585 aatcactgcaggtgtctaatccatccatctcatccaattaagctcgaaaaagaaaaaatg 2526
Query: 720 aaatttttttttttttttcttttcactatgtgaaaaagaagaaaaaacagaaaagttttc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2525 aaatttttttttttttttcttttcactatgtgaaaaagaagaaaaaacagaaaagttttc 2466
Query: 780 aacagggtatatattaggacttgagaagaggtaaatttttattagttataatcaacttag 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2465 aacagggtatatattaggacttgagaagaggtaaatttttattagttataatcaacttag 2406
Query: 840 caactatttaacaggttgtgtgattcagagtttgaactgatatcaagttagtataattta 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2405 caactatttaacaggttgtgtgattcagagtttgaactgatatcaagttagtataattta 2346
Query: 900 aagaactttttttaaa 915
||||||||||||||||
Sbjct: 2345 aagaactttttttaaa 2330
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 19,034
Number of Sequences: 1807
Number of extensions: 19034
Number of successful extensions: 2539
Number of sequences better than 1.0e-20: 1
length of query: 915
length of database: 10,358,551
effective HSP length: 16
effective length of query: 899
effective length of database: 10,329,639
effective search space: 9286345461
effective search space used: 9286345461
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)